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Best Small Business Accounting Software Shortlist

Here’s the shortlist of the 12 best small business accounting tools that I’ll cover.

  1. QuickBooks Online - Best for growing small businesses
  2. Xero - Best value for money
  3. FreshBooks - Best for issuing and tracking invoices
  4. Zoho Books - Best for preparing state sales taxes
  5. Wave - Best free option
  6. Sage Business Cloud Accounting - Best for inventory management
  7. Kashoo - Best for quick onboarding
  8. MarginEdge - Best for restaurant operators
  9. FreeAgent - Best for freelancers
  10. ZipBooks - Best for nonprofits
  11. Neat - Best for tracking receipts
  12. Digits - Best for AI accounting features

What is small business accounting software?

Small business accounting software is a type of software program designed to help small businesses manage their bookkeeping, general accounting, and financial reporting processes.

Typically, small business accounting software includes features such as invoicing, payroll, inventory management, and tax preparation, which can all be automated to save time and reduce errors.

The best small business accounting software can give you a clear view of your company’s cash flows and overall financial condition, automate bookkeeping and accounting processes, and produce more accurate financial reports.

Overview of the Best Small Business Accounting Software

In the overview sections below, I’ll discuss each software’s best use case, key features, and a few notable pros and cons.

1. QuickBooks Online - Best for growing small businesses

QuickBooks Online Dashboard Screenshot
QuickBooks' interface is simple to use, even for beginners, and the platform is scalable as your small business grows. (Image Source)

QuickBooks Online is a scalable accounting software that can accommodate the needs of small businesses as they grow and expand their operations. It's also the most widely used accounting software among small business owners.

Why I picked QuickBooks

I like QuickBooks Online because it’s accounting software that’s specifically designed for users with no previous accounting experience, so anyone can use it. You can use QuickBooks to track your income, expenses, and profits so you know how your business is doing.

This software will adapt to the accounting needs of your business as it grows.

QuickBooks Online Standout Features and Integrations

Standout Features include user-friendly tools to create standard financial statements and your own customized reports. Within Quickbooks, you can create and send invoices to customers, pay bills, automate recurring transactions, and reconcile your business bank accounts.

I really like how Quickbooks automatically organizes your business expenses into the correct tax category throughout the year, so you aren’t in a rush to get everything in order when it’s time to file. You can even sync Quickbooks to the GPS on your phone to track your mileage.

Plus, if you skip the free trial and buy a subscription, Quickbooks gives you free expert setup and 50% off your first three months.

Integrations include Shopify, Square, Gusto, Amazon Business and PayPal, and more than 750 other business applications.

Pricing: From $30 per month

Free trial: Free 30-day trial.

  • Easy to learn with extensive training materials and online chat support
  • No accounting knowledge needed
  • Connects to banks and credit cards with ease
  • Limited number of users
  • Above-average price point compared to alternatives

2. Xero - Best value for money

Xero Accounts Receivable Screenshot
Xero’s accounts receivable dashboard shows customers with past due accounts and gives you all of your important AR ratios and metrics. (Image Source)

Xero is a low-cost cloud-based accounting tool that’s perfect for sole proprietors and freelancers. Designed for small and medium-sized businesses, Xero is accessible on desktop or mobile, making it a great option for remote teams and business owners on the go.

Why I picked Xero

I chose Xero as the best value for its affordable pricing plans: Starter, Growing, and Established. The Starter plan starts at $13 per month and is suitable for very small businesses. The Growing plan costs $37 per month and offers more features, while the Established plan is $70 per month and is best for larger businesses. All three include a free trial period.

Xero Standout Features and Integrations

Standout Features include the ability to sync your business checking and credit card accounts with Xero. This allows you to automate your cash account reconciliations and ensure you’re capturing all of your business expenses.

Another feature that stood out to me was Xero’s security. Its encryption tools and two-factor authentication help to protect sensitive financial data and prevent unauthorized access.

Plus, its user-friendly interface makes it easy to navigate and use.

Integrations include Salesforce, Trello, Paypal, Stripe, Shopify, and over 800 other popular apps.

Pricing: From $13 per month

Free trial: Free 30-day trial

  • Affordable basic plan suitable for small businesses and independent contractors
  • Integration with Gusto for comprehensive payroll services
  • Efficient receipt scanning and data capture tool
  • Fees for ACH payments
  • Limited customer support

3. FreshBooks - Best for invoice management

Freshbooks Invoicing Screenshot
Freshbooks is a strong invoicing software to manage, track, and customize your customers. (Image Source)

FreshBooks is a cloud-based accounting and invoicing software that helps freelancers and small businesses easily track time, invoice clients, and manage expenses.

Why I picked Freshbooks

I really like the automated invoicing features, but FreshBooks’ financial reporting capabilities are really nice too. They allow you to easily track your business’s financial performance right from your main dashboard.

The software can generate all of the standard financial statements—balance sheet, statement of profit and loss, cash flow statement—so you can make informed business decisions.

Freshbooks Standout Features and Integrations

Standout Features include automated invoicing features to schedule invoices to be sent out at specified intervals. The library of customizable invoice templates lets you add logos, custom colors and fonts, and personalized messages.

The time-tracking capabilities allow you to track billable hours and use that data to quickly generate more accurate invoices. FreshBooks also offers automatic payment reminders so invoices get paid on time.

Integrations include Trello, Asana, Etsy, Square, Stripe, Indeed, and Toggl, among others.

Pricing: from $17 per month, and 10% off if billed yearly.

Free trial: Free 30-day trial

  • Custom invoicing features
  • Pricing is based on the number of clients
  • Live customer support
  • Mobile app has limited functionality
  • Fewer integrations than similar software

4. Zoho Books - Best for preparing state sales taxes

Zoho Books Sales Activity Screenshot
Zoho Books Sales Dashboard gives you an overview of your sales data and accommodates customized sales tax rates. (Image Source)

A cloud-based accounting tool, Zoho Books is great for reducing administrative work, allowing for customized sales tax rates for businesses with multiple locations.

Plus, you can access your financial data at any time with their mobile app.

Why I picked Zoho Books

I chose Zoho Books primarily because of its ability to automate several tasks related to sales taxes. Zoho Books can integrate with Avalara to automatically update sales tax rates and applicable exemptions across several locations.

Zoho Books Standout Features and Integrations

Standout Features include its sales tax capabilities, the ability to create automations for repetitive accounting tasks, and its customizable reports that provide insight into your business's financial health.

In my opinion, its financial reporting features really make Zoho Books worth the money. Not only is it easy to track the big metrics like sales revenue and operating expenses, but you can also dig into your cash flows, product returns, and inventory turnover.

Lastly, Zoho Books has several tools for sending payment reminders and categorizing transactions.

Integrations include Avalara, Square, PayPal, Stripe, and more than 50 other apps.

Pricing: From $15 per month, billed annually, for a plan with up to 3 users. Integration with Avalara is included with all paid plans.

Free trial: Free 14-day trial.

  • Sales tax rates are customizable and automatically updated
  • Free plan for businesses with less than $50,000 in annual revenue
  • Full-featured mobile app
  • Limited integrations with other apps
  • Steep learning curve

5. Wave - Best free small business accounting software

Wave Invoices Dashboard Screenshot
Wave is a free option for small businesses and freelancers to run their accounting on a limited budget. (Image Source)

Wave is a cloud-based accounting software that can help small businesses manage their finances efficiently. Wave is completely free to use, making it a good fit for small businesses with limited budgets.

Why I picked Wave

I chose Wave as the best free option because it can handle all your big accounting tasks despite being a free tool.

Wave's user-friendly interface provides step-by-step guidance for tasks like setting up an account, managing expenses, invoicing, and reconciling bank transactions.

Wave Standout Features and Integrations

Standout Features include generation of the three essential accounting reports (income statement, balance sheet, and cash flow statement) and tax payment and filing in 14 states.

I liked that Wave also gives you features like payroll management and receipt scanning to help streamline financial tasks. The software has integrations with other software tools like payment processors and project management software.

Integrations include third-party integrations via Zapier and other apps within Wave.

Pricing: Free (payroll processing starts at $20 per month)

Free trial: Wave is already free.

  • Free accounting and invoicing
  • No limits on users, invoices, or connected bank accounts
  • Automated tax filing (in some states)
  • Few integrations
  • Higher payment processing fees

6. Sage 50cloud Accounting - Best for inventory management

Sage 50cloud Accounting Inventory Screenshot
Sage 50cloud accounting offers inventory management well-suited for retailers. (Image Source)

Sage 50cloud has impressive inventory management features, allowing you to keep track of stock levels, establish reorder points, and create custom reports to help you make informed purchasing decisions.

Why I picked Sage 50cloud

I chose Sage 50cloud as the best for inventory management because of specialized features such as viewing quantities on hand when creating invoices and receiving alerts for low or no stock.

I also liked that Sage 50cloud lets you upgrade to the enterprise-level tier for a reasonable price, giving your business room to grow.

Sage 50cloud Standout Features and Integrations

Standout Features include cash flow and invoicing management, payments and banking automation, and advanced inventory tracking with low stock alerts.

In my opinion, Sage 50cloud really stands out in terms of flexibility. You can customize the software to meet the specific needs of your business, whether you need to manage inventory, process payroll, or create custom reports.

Integrations include third-party integrations with Microsoft 365, PayPal, Shopify, AutoEntry, and more. Additional customizations through the Sage suite of business software.

Pricing: From $57.17 per month for one-user plans. Higher pricing plans for more users and a discount for paying annually.

Free trial: Free product demo available

  • More customizations than most small business accounting software
  • Advanced inventory management
  • Integration with Microsoft 365 (Outlook, Teams, and more)
  • Most pricing plans cap out at five users
  • Higher cost than alternatives

7. Kashoo - Best for quick onboarding

Kashoo New Invoice Detail screenshot
Kashoo focuses on simple design to automate the tracking of invoices and expenses and the generation of accounting reports. (Image Source)

Kashoo accounting software is a great solution for small businesses with users with a wide range of computer skills. Kashoo offers a minimalist interface so users can navigate it quickly. The clean design approach is available on the mobile app as well.

Why I picked Kashoo

I chose Kashoo for best for quick onboarding for its combination of simple design, ease of use, and customer service. The platform can scale depending on the type of user (owner vs. accountant) or needs of your business.

Kashoo Standout Features and Integrations

Standout Features include import of business bank accounts and credit cards to convert into accounting entries and reports. Also, the ability to pay expenses via ACH or paper check.

I like that Kashoo gives you a step-by-step onboarding guide and a support team that’s always available, making it excellent for businesses without prior accounting experience. Customer service provides multiple support channels like email, phone, and live chat. This helps users manage their finances effectively and efficiently, getting the support they need when they need it.

Integrations include Stripe, Square, Shopify, and PayPal. It also offers integration with Zapier to connect with additional applications.

Pricing: From $216 per year

Free trial: 14-day free trial

  • Clean and intuitive design
  • Mobile app for managing finances on-the-go
  • Excellent customer support and onboarding experience
  • Limited integrations compared to some other options
  • No option for multi-currency invoicing

8. MarginEdge - Best for restaurant operators

MarginEdge Sales and Expenses Screenshot
MarginEdge offers a comprehensive accounting, invoicing, and inventory management solution for restaurant operators. (Image Source)

MarginEdge is a restaurant management software that helps streamline operations and improve profitability for restaurant owners. One potential downside of MarginEdge is its pricing, which is a better fit for an established restaurant chain with two or more locations than for a food truck operator.

Why I picked MarginEdge

I chose MarginEdge for restaurant operators because its inventory management is tailored to recipe management. You’ll gain insights such as how much to buy and what the optimal cost point is.

MarginEdge's user-friendly interface and intuitive design make it easy for restaurant staff to learn and use the software. Furthermore, the software provides restaurant owners with detailed recipe cost analysis, along with several other distinctive features, enabling them to gain valuable financial insights.

MarginEdge Standout Features and Integrations

Standout Features include full recipe management ‌to build a menu, track ingredients, set pricing, and reduce food waste. Additional tools include time tracking of labor and digital issuing and paying of invoices.

Another feature that stood out to me was MarginEdge’s invoice automation capabilities. Its OCR technology scans your invoices and puts key invoice details where they belong, reducing manual data entry and human error.

The software also provides real-time data analytics, allowing restaurant owners to track inventory and sales and make data-driven decisions.

Integrations include QuickBooks, Sage, and over 60 POS systems (Aldelo, Clover, SpotOn, and more).

Pricing: $300 per month per location.

Free trial: Free product demo available

  • Daily reconciliation of revenues and expenses
  • Full tracking of food waste helps optimize inventory
  • Tracks the productivity of various back-of-house operations
  • Cost may be too high for small operators
  • Better for restaurants than small businesses needing general accounting software

9. FreeAgent - Best for freelancers

FreeAgent Main Overview Page Screenshot
FreeAgent is an accounting software designed to help freelancers and small businesses manage their finances and bookkeeping. (Image Source)

FreeAgent includes a comprehensive set of tools for managing invoices, expenses, bank transactions, and tax returns, all in one place. The software provides a user-friendly interface that guides users to navigate and access essential features.

Why I picked FreeAgent

I chose FreeAgent as best for freelancers because it addresses their key needs: creation of estimates, tracking of billable time, overview of existing projects, and shipping of invoices.

FreeAgent is designed for freelancers with features such as invoicing and expense tracking and integration with popular payment platforms like PayPal and Stripe. The software also integrates with various third-party applications, providing users with more flexibility and options.

FreeAgent Standout Features and Integrations

Standout Features invoicing, expense tracking, project management, integration with popular payment platforms, and tax estimation.

I really liked how FreeAgent’s project management tools simplify time tracking and expense reporting. Tagging time and expenses to specific projects makes it easy for freelancers to manage and bill for their work.

The software also provides insights into the financial health of the business, including cash flow and profit and loss reports.

Integrations include payment platforms (Paypal, Stripe) and project management tools (Slack, Trello).

Pricing: $12 per month for first six months, then $24 per month

Free trial: 30-day free trial

  • Unlimited number of users, clients, and projects
  • No set-up fees
  • Integration with popular payment platforms and project management tools
  • Customer service is based in the UK
  • Limited customization of invoices

10. ZipBooks - Best for nonprofits

ZipBooks Donation Management Screenshot
ZipBooks is free accounting software for eligible nonprofits and is designed with specific features for tracking donations, building budgets, and managing account balances. (Image Source)

ZipBooks offers a free version specifically for nonprofits with unlimited bookkeeping, invoicing, and donor management features. This helps nonprofits keep track of contributions and expenses, so they can focus on their mission.

Why I picked ZipBooks

I chose ZipBooks as the best for nonprofits because it doesn’t charge eligible nonprofits. Saving on software allows you to allocate those dollars toward your organization’s mission.

ZipBooks Standout Features and Integrations

Standout Features include automated bookkeeping, grant tracking, and donor management. The mobile app can send invoices, mark payments, and track expenses. You'll receive donation tracking and management to manage donor information and contributions easily. ZipBooks allows you to track donor information, recurring donations, and in-kind donations.

I like that ZipBooks’ financial reports can help your nonprofit gain more insight into its finances by breaking out donor-restricted and non-restricted totals in your statement of activities (the income statement for nonprofits), balance sheet, and cash flow statement. This data enables nonprofits to make informed decisions about fundraising and spending.

Integrations include Gusto (payroll), Square, Stripe, Paypal (payment processing), and Slack (team collaboration).

Pricing: Free for nonprofits (a cost may be applicable for some customizations). Plans for non-nonprofits range from free to $35 per month (the most popular plan is $15 per month)

Free trial: Already free, 30-day free trial for non-nonprofits

  • Customized for nonprofits
  • Free plan available
  • Mobile app allows you to request and receive donations on the go
  • Limited features compared to those of paid plans from ZipBooks
  • No phone support

11. Neat - Best for tracking receipts

Neat Invoice Tracking Dashboard Screenshot
Neat has a mobile app that allows you to upload receipts with your smartphone and automatically itemize line items into your reports. (Image Source)

As a small business owner, tracking expenses can be a daunting task, but Neat can make it easier.

Why I picked Neat

I chose Neat as the best for tracking receipts because it leverages your smartphone to track expenses on the go. Overall, Neat offers a simple and intuitive interface, making it easy to navigate and use for all of your accounting needs.

Plus, with its cloud-based system, you can access your data from anywhere. However, Neat may not be suitable for larger businesses with more complex accounting needs.

Neat Standout Features and Integrations

Standout Features include receipt scanning, expense tracking, and detailed reporting. The receipt tracking system allows you to scan, organize and store your receipts digitally.

One of the features that stood out to me is Neat’s optical character recognition (OCR) technology which automatically extracts key details and line items from receipts, saving you time.

Another important feature I like is Neat’s ability to import bank and credit card transactions, making it easier to reconcile your accounts. You can also create professional-looking invoices and manage your inventory with Neat's software.

Integrations include Outlook, several email platforms (Mailchimp, Constant Contact, Campaign Monitor), QuickBooks, and H&R Block.

Pricing: $200 per year

Free trial: 14-day free trial

  • Excellent receipt scanning and data capture technology
  • Allows for easy expense management and categorization
  • Offers integration with popular accounting software like QuickBooks and Xero
  • Higher price point than alternatives
  • No time-tracking and payroll processing features

12. Digits - Best for AI accounting features

Digits Accounting Visualization Feature Screenshot
Digits uses AI algorithms to help you visualize your financial performance and create more accurate sales and expense forecasts. (Image Source)

Digits is an AI-powered accounting software that processes and automates accounting tasks. It uses machine learning algorithms to analyze financial data, detect fraud, and provide insights.

Why I picked Digits

I chose Digits for its AI accounting features because it goes beyond data processing. The software helps you identify trends, make predictions, and put data into context.

With drag-and-drop reporting and visualization features, users can create customized reports and visualizations to illustrate trends and highlight anomalies.

Digits automatically captures and categorizes financial transactions, sales data, and customer behavior to generate insights for informed decision-making.

Digits Standout Features and Integrations

Standout Features include AI-powered features like cash flow tracking, drag-and-drop reporting, and visualization. It identifies anomalies and trends and provides insights for decision-making.

Additionally, Digits adds logos to transactions for easier vendor identification, identifies changes in recurring expenses to prevent overpayment and fraud, and reduces errors by analyzing bank statements, invoices, and payment receipts to match them to corresponding accounts.

I also really like Digits’ modern, smooth interface.

Integrations include QuickBooks, Xero, NetSuite, Stripe, PayPal, and Square.

Pricing: Free for up to five clients, then from $99 per month.

Free trial: 14-day free trial

  • AI helps identify anomalies, trends, and insights
  • Real-time cash flow tracking and detailed financial reporting
  • Automation options
  • Somewhat of a newcomer in the market
  • No time-tracking or payroll processing features

Other Small Business Accounting Software Options

Here are a few more great options that didn’t make the best small business accounting software list:

Illustration of alternatives for best small business accounting software.
  1. AccountEdge Pro - Best for full-featured desktop accounting
  2. Plooto - Best for end-to-end accounts payable management
  3. Manager - Best free accounting for Linux operating system
  4. Odoo - Best for unlimited number of users
  5. Aplos - Best for churches
  6. GnuCash - Best for open-source accounting
  7. LessAccounting - Best for templated workflows
  8. InvoiceBerry - Best for beginning freelancers

How I Selected the Best Small Business Accounting Software

To create the top 12 list, I evaluated and refined my selections by applying the following criteria to compare the performance of each platform. I also drew on my own industry experience to pinpoint ‌features that add a lot of value.

Selection Criteria for the Best Small Business Accounting Software

Let’s review the main selection criteria I used to put together my list of the best small-business accounting software for this article:

A list of selection criteria for small business accounting software

Core Functionality

I looked for small business accounting software that helps owners and managers to automate accounting and financial reporting processes, including:

  • Maintain general ledger and chart of accounts
  • Perform general accounting and basic bookkeeping processes
  • Generate a standard set of financial statements and internal reports
  • Track and categorize the cost of labor, materials, and other operating expenses
  • Analyze and summarize financial data to inform management’s goal-setting decision-making processes

Key Features

Key features I sought include:

  • Cash flow visibility: Monitor cash inflows and outflows
  • Financial reporting features: Automate and customize financial reports to meet the needs of internal and external stakeholders
  • Expense tracking: Record and categorize business expenses easily
  • Invoicing and billing: Create and send invoices and monitor payment status
  • Bank integrations: Integrate with financial institution(s) for automatic bank account reconciliations
  • Mobile access: Access and manage accounting data remotely
  • Security and Data Backup: Strengthen data security with user role permissions and access restrictions


Small business owners wear a lot of hats, so my tool review ‌focused on finding tools that prioritize user-friendliness and offer excellent customer support.

Specifically, I looked for:

  • Straight-forward, clean user interface
  • Customizable workflows and automations
  • Mobile app availability and included features
  • Customer technical support contact methods and hours of operation

Value for money

The small business accounting software options listed in the article range in price from free (Wave) to $275 per month (Zoho Books).

Most of the software options fall within the range of $13 to $91.45 per month, with popular plans typically priced around $30 to $70 per month.

Some software options offer free trials or discounted pricing for initial periods.

Other software options offer free plans for eligible institutions, such as nonprofits or specific types of small businesses.


The small business accounting software options listed in the article offer a wide range of integrations with various business tools and platforms.

My goal was to find tools that connected with as many essential tools as possible. These integrations include popular services like payment processors, e-commerce platforms, payroll software, banking institutions, CRM systems, and more.

Frequently Asked Questions

This FAQ section answers some of the questions you may have about small business accounting software or how to know which option is the best fit for your business needs.


While each option in this guide has its own unique features, any of them would be a solid choice.

If the option you ultimately decide on fits your specific business requirements and works for your team, then you’ve chosen well.

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By Simon Litt

Simon Litt is the Editor of The CFO Club, where he shares his passion for all things money-related. Performing research, talking to experts, and calling on his own professional background, he'll be working hard to ensure that The CFO Club is an indispensable resource for anyone seeking to stay informed on the latest financial trends and topics in the world of tech.

Prior to editing this publication, Simon spent years working in, and running his own, investor relations agency, servicing public companies that wanted to reach and connect deeper with their shareholder base. Simon's experience includes constructing comprehensive budgets for IR activities, consulting CEOs & executive teams on best practices for the public markets, and facilitating compliant communications training.