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Logistics accounting software is built for businesses in transportation, warehousing, and supply chain management. It goes beyond basic bookkeeping to track freight costs, fuel expenses, driver payroll, delivery-based invoicing, and integrate with fleet and inventory systems. For logistics teams, it brings the financial clarity standard tools can’t.

As a digital software expert with a background in financial management, I’ve helped leaders in logistics and other regulated industries find solutions that actually fit their workflows. I’ve seen how the wrong software delays billing, complicates compliance, and adds hours of manual reconciliation. If your system can’t track route-level costs or tie revenue to deliveries, you’re missing critical insight.

To help you avoid those roadblocks, I’ve spent dozens of hours reviewing real user feedback and testing the top logistics accounting platforms. This guide focuses on tools that support how your business really runs, so you can choose with clarity and confidence.

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Best Logistics Accounting Software Summary

Here’s a quick look at what the best logistics accounting tools cost. I’ve compared them to help you find one that fits both your budget and the real-world needs of running a logistics or supply chain business.

Best Logistics Accounting Software Reviews

I’ve broken down the top logistics accounting software with key features, pros and cons, and real use cases. Whether you manage freight, fuel, or fleet costs, these summaries will help you quickly spot the right tool for your logistics business.

Best for freight forwarders

  • Free demo available
  • From $89/user/month
Visit Website
Rating: 5/5

Shipthis is a logistics accounting software designed for freight forwarding companies, focusing on freight and shipment management. It provides tools for rate management and customer relationship management to improve business operations. 

Why I picked Shipthis: Shipthis’ specialization in freight forwarding sets it apart from other logistics accounting systems. Its customer engagement portal allows clients to request quotes and track shipments easily, while the software supports multi-modal shipments and trade compliance, ensuring you meet industry standards. You can also manage invoices and roles through its advanced CRM, making it ideal for freight operations.

Standout features & integrations:

Features include real-time shipment tracking, automated workflows, and customizable reports. You can manage multiple branches from a single platform, making it easier to oversee operations. The software also supports eAWB submissions and trade compliance, which helps you stay compliant with industry regulations.

Integrations include QuickBooks, Xero, Microsoft Dynamics, Oracle NetSuite, SAP, Salesforce, Mailchimp, Google Workspace, Slack, and Microsoft Teams.

Pros and cons

Pros:

  • Multi-modal shipment support
  • Customizable reports and analytics
  • Advanced trade compliance features

Cons:

  • Limited customization for some features
  • Might be complex to set up

Best for real-time updates

  • Free trial available
  • From $120/year

Tyms is a modern, AI-powered accounting software designed for businesses seeking efficient financial management. Its main features include automated bank reconciliation, expense tracking, and real-time financial reporting, catering to both accountants and non-accountants.

Why I picked Tyms: Tyms’ real-time update capability is crucial for businesses needing timely financial insights. The platform offers automated invoicing and expense management, reducing manual workloads significantly. It also supports multiple currencies, making it suitable for global operations, while its KPI dashboard provides valuable analytics for decision-making.

Standout features & integrations:

Features include inventory valuation that helps manage stock efficiently and fixed asset management to track and depreciate assets accurately. It also automates prepayment processes, streamlining financial operations further.

Integrations include QuickBooks, Xero, SAP, Oracle NetSuite, Microsoft Dynamics, Salesforce, Google Workspace, Dropbox, Slack, and HubSpot.

Pros and cons

Pros:

  • Comprehensive KPI dashboard
  • Supports multiple currencies
  • Real-time financial updates

Cons:

  • Regular updates could be needed
  • Initial setup may be complex

Best for integrated solutions

  • Free demo available
  • Pricing upon request

Logi-Sys is an advanced logistics accounting software aimed at businesses wanting integrated solutions for their operations. It provides functionalities like financial accounting, freight management, and performance tracking to ensure effective logistics management.

Why I picked Logi-Sys: Logi-Sys’ ability to integrate various logistics functions within one platform is key. The financial accounting module offers tools for accurate billing and invoicing, reducing manual errors, while its freight management capabilities let you track shipments and optimize logistics processes. Additionally, the software’s performance tracking features provide insights into operational costs and efficiency, offering users dedicated integrated solutions.

Standout features & integrations:

Features include a customizable dashboard that provides a real-time overview of logistics operations, and an inventory management system that helps your team keep track of stock levels and movements. The software’s document management also ensures easy access and organization of critical business documents.

Integrations include SAP, Oracle NetSuite, Microsoft Dynamics, QuickBooks, Salesforce, Xero, Google Workspace, Dropbox, Slack, and HubSpot.

Pros and cons

Pros:

  • Advanced freight management features
  • Customizable dashboard for real-time insights
  • Effective performance tracking capabilities

Cons:

  • Requires consistent updates
  • Initial setup could be complex

Best for freight tracking

  • Free demo available
  • Pricing upon request

Account-Trak is a logistics accounting software tailored for freight forwarding companies, focusing on tracking shipments and managing financial transactions. It provides tools for efficient freight tracking and accounting processes to support logistics businesses.

Why I picked Account-Trak: Account-Trak’s focus on freight tracking makes it ideal for logistics firms. The software offers real-time tracking capabilities that let you monitor shipments closely, while its advanced accounting features ensure accurate financial management. You can also generate detailed reports within the platform to keep track of your business's financial health.

Standout features & integrations:

Features include advanced freight management tools that simplify tracking shipments from origin to destination, and an invoicing system that allows you to create and manage invoices efficiently. The software also provides customizable reporting options to help you generate insights tailored to your business needs.

Integrations include SAP, Oracle NetSuite, QuickBooks, Microsoft Dynamics, Salesforce, Xero, Google Workspace, Dropbox, Slack, and Mailchimp.

Pros and cons

Pros:

  • Supports detailed financial management
  • Efficient invoicing system
  • Real-time shipment tracking

Cons:

  • Limited customization for niche needs
  • Requires technical setup knowledge

Best for small logistics firms

  • Free trial + demo available
  • From $150/user/month

Linbis is a logistics accounting software designed for small logistics companies, focusing on freight management and accounting functions. It helps businesses handle shipping, warehousing, and invoicing tasks efficiently.

Why I picked Linbis: Linbis is tailored for small logistics firms, providing features that cater to their unique needs. The software offers a user-friendly interface that simplifies freight tracking and management. Its inventory management system also helps you keep track of stock levels and purchase orders. Additionally, teams can successfully generate detailed reports to aid in decision-making, making it a stand out fit for smaller operations.

Standout features & integrations:

Features include a freight calculator that estimates costs accurately, enabling better financial management, a document management system that allows you to store and access important freight documents easily, and real-time shipment tracking to keep you updated on the status of goods in transit.

Integrations include QuickBooks, Xero, SAP, Microsoft Dynamics, Oracle NetSuite, Salesforce, Google Workspace, Dropbox, Slack, and Mailchimp.

Pros and cons

Pros:

  • Real-time shipment updates
  • Effective inventory management
  • Detailed reporting capabilities

Cons:

  • Basic customization options
  • Limited features for larger firms

Best for Miami-based companies

  • Free demo available
  • Pricing upon request

Logisuite Financials is an integrated accounting solution designed for logistics companies, particularly those based in Miami. It handles accounting, freight management, and financial reporting to improve logistics operations.

Why I picked Logisuite Financials: Logisuite Financials’ tailored to meet the needs of Miami-based logistics firms. The software provides advanced financial management tools, enabling you to handle billing and invoicing efficiently. Its freight management capabilities also let you track shipments and manage logistics tasks seamlessly. Additionally, detailed financial reporting tools offer insights into your business performance, allowing you to make informed decisions based on your company needs.

Standout features & integrations:

Features include an inventory management system that helps you keep track of stock levels and movements. The software also supports multiple currencies, essential for businesses operating internationally and offers customizable dashboards to view key performance indicators quickly.

Integrations include QuickBooks, Xero, SAP, Oracle NetSuite, Microsoft Dynamics, Salesforce, Slack, Google Workspace, Dropbox, and HubSpot.

Pros and cons

Pros:

  • Customizable dashboard for quick insights
  • Supports multiple currencies
  • Tailored for Miami-based logistics firms

Cons:

  • May have a steep learning curve
  • Requires technical setup knowledge

Best for mobile access

  • Free demo available
  • Pricing upon request

Logestechs is a logistics accounting management system designed for businesses that need accounting solutions on the go. It caters to professionals who require mobile accessibility to manage financial and logistics tasks efficiently.

Why I picked Logestechs: Logestechs' mobile accessibility feature is vital for on-the-go management. The software offers a mobile app that lets you access key financial data anytime. You can also approve invoices and track expenses directly from your smartphone. This flexibility makes it ideal for teams that need constant connectivity and swift decision-making.

Standout features & integrations:

Features include customizable reports that help you analyze financial performance easily, an expense management system that ensures you can track and categorize expenses efficiently, and an invoicing tool to help you create and send invoices quickly from anywhere.

Integrations include QuickBooks, Xero, SAP, Microsoft Dynamics, Salesforce, Oracle NetSuite, Google Workspace, Dropbox, Slack, and HubSpot.

Pros and cons

Pros:

  • Quick invoice creation capability
  • Efficient expense tracking features
  • Mobile access for on-the-go use

Cons:

  • Limited features for desktop users
  • Setup may require technical knowledge

Best for fleet management

  • Free plan available
  • From $168/month (billed annually)

FleetRunnr offers a logistics management platform tailored to optimize fleet and logistics operations. It supports businesses in managing shipping workflows and tracking financial data effectively.

Why I picked FleetRunnr: FleetRunnr focuses on delivering an all-in-one solution that simplifies fleet tracking and logistics processes. Its real-time tracking keeps you updated on shipments, while automation tools help you handle repetitive tasks effortlessly. You can also manage billing and invoicing through an integrated system, reducing manual errors. 

Standout features & integrations:

Features include tools for fleet tracking, automated workflow management, and financial reporting. You’ll have access to a dashboard that consolidates your logistics and financial data, giving you a clear view of your operations. Its user-friendly design also means you can get started without extensive training.

Integrations include QuickBooks, Xero, Salesforce, SAP, Oracle NetSuite, FreshBooks, Microsoft Dynamics, Zoho Books, and Sage.

Pros and cons

Pros:

  • Detailed performance analytics
  • Manages complex shipping workflows
  • Clear and customizable dashboards

Cons:

  • Lack of mobile app for some features
  • Limited offline functionality

Best for European markets

  • 30-day free trial
  • From $8.99/user/month (billed annually)

Logistiqo is a logistics accounting software tailored for European businesses, focusing on transport and logistics industry management. It offers advanced solutions for freight forwarding, billing, and fleet management.

Why I picked Logistiqo: Logistiqo caters specifically to the European market, ensuring compliance with regional regulations. The software’s advanced scheduling features help you manage freight efficiently, accommodating different transport modes. It also supports detailed billing and invoicing processes, which is vital for European companies. Overall, Logistiqo’s fleet management capabilities let you oversee vehicles and drivers from one platform.

Standout features & integrations:

Features include a dynamic scheduling engine that adapts to changes in transport demands. You can track fleet utilization and maintenance to optimize vehicle use. The billing system also accommodates multiple currencies, which is essential for cross-border operations.

Integrations include SAP, Microsoft Dynamics, QuickBooks, Xero, Salesforce, Oracle NetSuite, Google Workspace, Slack, Dropbox, and HubSpot.

Pros and cons

Pros:

  • Advanced freight scheduling tools
  • Supports multiple transport modes
  • Tailored for European regulations

Cons:

  • Requires frequent updates
  • Steep learning curve for new users

Best for cloud accounting

  • 30-day free trial
  • From $2/month

Xero is a cloud-based accounting software designed for small businesses, including those in the logistics sector. It provides functionalities like invoicing, expense tracking, and financial reporting to support business operations.

Why I picked Xero: Xero’s cloud-based nature makes it accessible from anywhere, ideal for logistics businesses needing flexibility. The platform offers automatic bank reconciliation to keep your accounts accurate. You can also generate invoices quickly, helping you maintain cash flow. 

Standout features & integrations:

Features include inventory management that allows you to track stock levels effectively, and a budgeting tool to help you plan and allocate resources wisely. Xero also supports multi-currency transactions, which is beneficial for international logistics operations.

Integrations include Stripe, PayPal, Square, HubSpot, Shopify, Salesforce, Mailchimp, Google Workspace, Dropbox, and Slack.

Pros and cons

Pros:

  • Effective inventory management
  • Automatic bank reconciliation
  • Accessible from any location

Cons:

  • May require initial setup assistance
  • Limited features for large enterprises

Other Logistics Accounting Software

Here are some additional logistics accounting software options that didn’t make it onto my shortlist, but are still worth checking out:

  1. OnAccount

    For New Zealand businesses

  2. Sage Intacct

    For medium-sized enterprises

  3. CargoNet

    For freight forwarding

  4. Alvys

    For TMS integration

  5. Keeper

    For small bookkeeping teams

  6. Netgain

    For cloud-based flexibility

  7. Access Financials

    For UK transport companies

  8. LeaseQuery

    For lease accounting

Logistics Accounting Software Selection Criteria

When researching the best logistics accounting software I focused on what matters most: handling complex billing, staying compliant, and tracking costs accurately. To keep things clear and fair, I used a consistent evaluation framework based on real-world challenges logistics teams face every day.

Core Functionality (25% of total score)
To be considered for inclusion in this list, each solution had to fulfill these common use cases:

  • Manage billing and invoicing
  • Track expenses and financial transactions
  • Generate financial reports
  • Support multi-currency transactions
  • Integrate with existing logistics systems

Additional Standout Features (25% of total score)
To help further narrow down the competition, I also looked for unique features, such as:

  • Real-time shipment tracking
  • Advanced compliance tools
  • Customizable dashboards
  • Automated reconciliation processes
  • Predictive analytics capabilities

Usability (10% of total score)
To get a sense of the usability of each system, I considered the following:

  • Intuitive user interface
  • Easy navigation and accessibility
  • Minimal learning curve
  • Clear and concise instructions
  • Responsive design for mobile access

Onboarding (10% of total score)
To evaluate the onboarding experience for each platform, I considered the following:

  • Availability of training videos
  • Interactive product tours
  • Access to templates and resources
  • Supportive webinars and chatbots
  • Comprehensive user guides

Customer Support (10% of total score)
To assess each software provider’s customer support services, I considered the following:

  • Availability of live chat support
  • 24/7 customer service access
  • Comprehensive knowledge base
  • Responsive email support
  • Dedicated account managers

Value For Money (10% of total score)
To evaluate the value for money of each platform, I considered the following:

  • Competitive pricing structures
  • Range of features offered
  • Flexibility in subscription plans
  • Transparency in pricing
  • Cost-benefit ratio

Customer Reviews (10% of total score)
To get a sense of overall customer satisfaction, I considered the following when reading customer reviews:

  • Overall satisfaction ratings
  • Feedback on customer support
  • Ease of implementation experiences
  • Consistency of positive reviews
  • Specific feature praises or complaints

How to Choose a Logistics Accounting Software

As someone who lives and breathes digital tools, I get how overwhelming comparing logistics accounting software can be. This is the checklist I rely on to help me narrow in on the best solutions:

FactorWhat to Consider
ScalabilityEnsure the software can grow with your business, handling increased transactions without a hitch.
IntegrationsCheck if it connects with your existing systems like ERP or CRM for faultless data flow.
CustomizabilityLook for options that let you tailor reports and dashboards to fit your operations.
Ease of UsePick software that's intuitive for your team, reducing the learning curve.
BudgetEvaluate if the cost aligns with your financial plan and offers value for its features.
Security SafeguardsConfirm it meets industry standards to protect sensitive financial information.
Customer SupportReliable support can save time and resolve issues quickly. Consider the software’s availability, customer channels, and forums for additional assistance.
ComplianceCheck if it adheres to relevant accounting standards and regulations in your region.

I dug through product updates, press releases, and change logs from logistics accounting software vendors. Here are the key trends I’m watching that you should, too:

  • Blockchain Integration: Companies are starting to use blockchain for secure and transparent transactions. This technology ensures data integrity and can help reduce fraud in logistics accounting. 
  • AI-Driven Analytics: Artificial intelligence is being used to provide advanced insights and predictive analytics. This helps businesses make data-driven decisions and optimize their financial strategies. 
  • Sustainability Tracking: As businesses focus on sustainability, there's a growing demand for software that tracks carbon footprints and resource usage. This trend helps companies align with eco-friendly practices and comply with regulations.
  • Dynamic Pricing Models: Vendors are offering flexible pricing based on usage patterns, allowing companies to scale their costs with their operations. This approach makes logistics accounting software more accessible to various business sizes and needs.
  • Enhanced Data Visualization: Improved data visualization tools are helping users quickly interpret financial data through intuitive charts and graphs. These features make it easier to spot trends and anomalies, aiding in faster decision-making. 

What Is Logistics Accounting Software?

Logistics accounting software is a tool designed to manage the financial aspects of logistics operations, including billing, expense tracking, and financial reporting. They are typically used by financial professionals, logistics managers, and small business owners to enhance financial accuracy and efficiency. 

Key features like automated invoicing, real-time tracking, revenue management, and data visualization help with managing complex transactions, making informed decisions, and ensuring compliance with regulations. Overall, these tools provide significant value by improving financial oversight and operational efficiency in logistics businesses.

Features of Logistics Accounting Software

Top logistics accounting software does more than crunch numbers; it helps track loads, manage driver pay, and sync with fleet systems, making your job smoother and more precise. These are the key features that make this possible:

  • Automated Invoicing: Saves time by automatically generating and sending invoices to clients, reducing manual errors.
  • Expense Tracking: Monitors and categorizes expenses to help manage cost efficiency and financial planning.
  • Real-Time Tracking: Provides up-to-date information on financial transactions and logistics activities, aiding in quick decision-making.
  • Financial Reporting: Generates detailed reports that offer insights into business performance and financial health.
  • Multi-Currency Support: Facilitates international operations by handling transactions in different currencies, ensuring accurate financial management.
  • Data Visualization: Uses charts and graphs to present financial data clearly, making it easy to spot trends and anomalies.
  • Inventory Management: Helps track stock levels and movements, ensuring efficient logistics operations. This is especially beneficial for supply chain management processes.
  • AI-Driven Analytics: Offers predictive insights and advanced analytics to support strategic financial decisions.
  • Blockchain Integration: Ensures secure and transparent transactions, enhancing data integrity and reducing fraud.
  • Compliance Tools: Assists in meeting industry regulations and standards, minimizing risks, and ensuring legal compliance.

Benefits of Logistics Accounting Software

Logistics accounting software leads to better cost tracking, real-time reporting, and smoother billing. But that's not all. Here are a few other key benefits you might experience:

  • Time Savings: Automated processes like invoicing and reconciliation reduce manual work, freeing up time for your team.
  • Improved Accuracy: Real-time tracking and expense management minimize errors, ensuring precise financial records.
  • Better Decision-Making: Data visualization and AI-driven analytics provide insights that help you make informed business decisions.
  • Enhanced Compliance: Compliance tools ensure you meet industry regulations, reducing the risk of legal issues.
  • Cost Efficiency: Expense tracking and financial reporting help you identify areas to cut costs and improve profitability.
  • Global Reach: Multi-currency support allows you to handle international transactions smoothly, expanding your market potential. This is beneficial for companies and nonprofits managing finances overseas.
  • Increased Transparency: Blockchain integration offers secure and transparent transactions, building trust with stakeholders.

Costs and Pricing of Logistics Accounting Software

I get it—pricing can get confusing fast. Logistics accounting software costs vary based on features, team size, and extras. I’ve broken down the most common plans, average prices, and what’s typically included so you can compare with confidence and find the right fit for your operation.

Plan Comparison Table for Logistics Accounting Software

Plan TypeAverage PriceCommon Features
Free Plan$0Basic invoicing and expense tracking.
Personal Plan$10-$30/user/monthAutomated invoicing, real-time tracking, and limited reporting.
Business Plan$40-$70/user/monthMulti-currency support, advanced reporting, and inventory management.
Enterprise Plan$80-$150/user/monthCustomizable dashboards, AI-driven analytics, compliance tools, and blockchain integration.

Logistics Accounting Software FAQs

Here are some answers to common questions about logistics accounting software:

Why should I choose cloud-based logistics accounting software?

Cloud-based logistics accounting software offers flexibility and accessibility, allowing you to access data from anywhere with an internet connection. This can be particularly useful if your team is remote or frequently on the move. Cloud solutions often provide automatic updates, ensuring you always have the latest features without manual intervention.

How do logistics accounting tools integrate with existing systems?

Most logistics accounting tools offer integrations with popular ERP and CRM systems, making it easier to sync data across platforms. This integration helps assemble workflows and reduces data duplication, ensuring that your financial data remains consistent and accurate. When evaluating software, check for compatibility with the systems you already use.

What are the security features of logistics accounting software?

Security features often include data encryption, user authentication, and regular security audits to protect sensitive financial information. These tools also provide role-based access controls, ensuring only authorized personnel can access certain data. It’s crucial to choose a solution that complies with industry standards and regulations to safeguard your business data.

Can logistics accounting software handle multiple currencies?

Many logistics accounting solutions support multi-currency transactions, which is vital for businesses operating internationally. This feature allows you to manage finances in different currencies, automatically converting amounts using up-to-date exchange rates. It simplifies global operations and ensures accurate financial reporting.

How do these tools help with compliance?

Logistics accounting software often includes compliance tools that help you adhere to industry regulations and standards. This can include automated tax calculations, audit trails, and reporting features that ensure your financial practices meet legal requirements. Compliance tools minimize the risk of penalties and enhance your business’s credibility.

What kind of reporting capabilities are available?

Advanced reporting capabilities in logistics accounting software provide detailed insights into your financial health. These tools often include customizable dashboards, real-time data visualization, and the ability to generate various reports, such as profit and loss statements or cash flow analyses. This helps you make informed business decisions based on accurate data.

What’s Next?

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Drew Robertson
By Drew Robertson

Drew currently works as the Financial Controller for Black & White Zebra, leading the finance department for the company. Prior to BWZ, he was at EY for six years, including two as a manager.

He received his undergraduate degree at the Ivey Business School in Canada and MBA from Oxford University.